Retrieval-Augmented Generation (RAG) plays a crucial role in grounding Large Language Models by leveraging external knowledge, whereas the effectiveness is often compromised by the retrieval of contextually flawed or incomplete information. To address this, knowledge graph-based RAG methods have evolved towards hierarchical structures, organizing knowledge into multi-level summaries. However, these approaches still suffer from two critical, unaddressed challenges: high-level conceptual summaries exist as disconnected ``semantic islands'', lacking the explicit relations needed for cross-community reasoning; and the retrieval process itself remains structurally unaware, often degenerating into an inefficient flat search that fails to exploit the graph's rich topology. To overcome these limitations, we introduce LeanRAG, a framework that features a deeply collaborative design combining knowledge aggregation and retrieval strategies. LeanRAG first employs a novel semantic aggregation algorithm that forms entity clusters and constructs new explicit relations among aggregation-level summaries, creating a fully navigable semantic network. Then, a bottom-up, structure-guided retrieval strategy anchors queries to the most relevant fine-grained entities and then systematically traverses the graph's semantic pathways to gather concise yet contextually comprehensive evidence sets. The LeanRAG can mitigate the substantial overhead associated with path retrieval on graphs and minimizes redundant information retrieval. Extensive experiments on four challenging QA benchmarks with different domains demonstrate that LeanRAG significantly outperforming existing methods in response quality while reducing 46\% retrieval redundancy. Code is available at: https://github.com/RaZzzyz/LeanRAG

Large language models (LLMs) often miscommunicate their uncertainty: repeated queries can produce divergent answers, yet generated responses are typically unhedged or hedged in ways that do not reflect this variability. This conveys unfaithful information about the uncertain state of the LLMs' knowledge, creating a faithfulness gap that affects even strong LLMs. We introduce Faithful Uncertainty Tuning (FUT): a fine-tuning approach that teaches instruction-tuned LLMs to express uncertainty faithfully without altering their underlying answer distribution. We construct training data by augmenting model samples with uncertainty hedges (i.e. verbal cues such as 'possibly' or 'likely') aligned with sample consistency, requiring no supervision beyond the model and a set of prompts. We evaluate FUT on open-domain question answering (QA) across multiple models and datasets. Our results show that FUT substantially reduces the faithfulness gap, while preserving QA accuracy and introducing minimal semantic distribution shift. Further analyses demonstrate robustness across decoding strategies, choice of hedgers, and other forms of uncertainty expression (i.e. numerical). These findings establish FUT as a simple and effective way to teach LLMs to communicate uncertainty faithfully.

Improving large language models (LLMs) for electronic health record (EHR) reasoning is essential for enabling accurate and generalizable clinical predictions. While LLMs excel at medical text understanding, they underperform on EHR-based prediction tasks due to challenges in modeling temporally structured, high-dimensional data. Existing approaches often rely on hybrid paradigms, where LLMs serve merely as frozen prior retrievers while downstream deep learning (DL) models handle prediction, failing to improve the LLM's intrinsic reasoning capacity and inheriting the generalization limitations of DL models. To this end, we propose EAG-RL, a novel two-stage training framework designed to intrinsically enhance LLMs' EHR reasoning ability through expert attention guidance, where expert EHR models refer to task-specific DL models trained on EHR data. Concretely, EAG-RL first constructs high-quality, stepwise reasoning trajectories using expert-guided Monte Carlo Tree Search to effectively initialize the LLM's policy. Then, EAG-RL further optimizes the policy via reinforcement learning by aligning the LLM's attention with clinically salient features identified by expert EHR models. Extensive experiments on two real-world EHR datasets show that EAG-RL improves the intrinsic EHR reasoning ability of LLMs by an average of 14.62%, while also enhancing robustness to feature perturbations and generalization to unseen clinical domains. These results demonstrate the practical potential of EAG-RL for real-world deployment in clinical prediction tasks. Our code have been available at https://github.com/devilran6/EAG-RL.

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As Multimodal Large Language Models (MLLMs) advance, multimodal agents show promise in real-world tasks like web navigation and embodied intelligence. However, due to limitations in a lack of external feedback, these agents struggle with self-correction and generalization. A promising approach is to use reward models as external feedback, but there is no clear on how to select reward models for agents. Thus, there is an urgent need to build a reward bench targeted at agents. To address these challenges, we propose Agent-RewardBench, a benchmark designed to evaluate reward modeling ability in MLLMs. The benchmark is characterized by three key features: (1) Multiple dimensions and real-world agent scenarios evaluation. It covers perception, planning, and safety with 7 scenarios; (2) Step-level reward evaluation. It allows for the assessment of agent capabilities at the individual steps of a task, providing a more granular view of performance during the planning process; and (3) Appropriately difficulty and high-quality. We carefully sample from 10 diverse models, difficulty control to maintain task challenges, and manual verification to ensure the integrity of the data. Experiments demonstrate that even state-of-the-art multimodal models show limited performance, highlighting the need for specialized training in agent reward modeling. Code is available at github.

By retrieving contexts from knowledge graphs, graph-based retrieval-augmented generation (GraphRAG) enhances large language models (LLMs) to generate quality answers for user questions. Many GraphRAG methods have been proposed and reported inspiring performance in answer quality. However, we observe that the current answer evaluation framework for GraphRAG has two critical flaws, i.e., unrelated questions and evaluation biases, which may lead to biased or even wrong conclusions on performance. To tackle the two flaws, we propose an unbiased evaluation framework that uses graph-text-grounded question generation to produce questions that are more related to the underlying dataset and an unbiased evaluation procedure to eliminate the biases in LLM-based answer assessment. We apply our unbiased framework to evaluate 3 representative GraphRAG methods and find that their performance gains are much more moderate than reported previously. Although our evaluation framework may still have flaws, it calls for scientific evaluations to lay solid foundations for GraphRAG research.

Scaling test-time computation--generating and analyzing multiple or sequential outputs for a single input--has become a promising strategy for improving the reliability and quality of large language models (LLMs), as evidenced by advances in uncertainty quantification and multi-step reasoning. A key shared component is semantic clustering, which groups outputs that differ in form but convey the same meaning. Semantic clustering enables estimation of the distribution over the semantics of outputs and helps avoid redundant exploration of reasoning paths. However, existing approaches typically rely on external models, which introduce substantial computational overhead and often fail to capture context-aware semantics. We propose Latent Semantic Clustering (LSC), a lightweight and context-sensitive method that leverages the generator LLM's internal hidden states for clustering, eliminating the need for external models. Our extensive experiment across various LLMs and datasets shows that LSC significantly improves the computational efficiency of test-time scaling while maintaining or exceeding the performance of existing methods.

Retrieval-Augmented Generation (RAG) enables large language models to provide more precise and pertinent responses by incorporating external knowledge. In the Query-Focused Summarization (QFS) task, GraphRAG-based approaches have notably enhanced the comprehensiveness and diversity of generated responses. However, existing GraphRAG-based approaches predominantly focus on coarse-grained information summarization without being aware of the specific query, and the retrieved content lacks sufficient contextual information to generate comprehensive responses. To address the deficiencies of current RAG systems, we propose Context-Aware Fine-Grained Graph RAG (FG-RAG) to enhance the performance of the QFS task. FG-RAG employs Context-Aware Entity Expansion in graph retrieval to expand the coverage of retrieved entities in the graph, thus providing enough contextual information for the retrieved content. Furthermore, FG-RAG utilizes Query-Level Fine-Grained Summarization to incorporate fine-grained details during response generation, enhancing query awareness for the generated summarization. Our evaluation demonstrates that FG-RAG outperforms other RAG systems in multiple metrics of comprehensiveness, diversity, and empowerment when handling the QFS task. Our implementation is available at https://github.com/BuptWululu/FG-RAG.